Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTRVVVIGSGFAGLWAALGAARRLDELAVLAGTVDVMVVSNKPFHDIR-----VRNYEADLSACRIPLGDVLGPAGVAHVTAEVTAIDADGRRVTTS----TGASYSYDRLVLASGSHVVKPALPGLAEFGFDVDTYDGAVRLQQHLQGLAGGPLT------------SAAATVVVVGAGLTGIETACELPGRLHALFARGDGVTPRVVLIDHNPFVG-SDMGLSARPVIEQALLDNGVETRTGVSVAAVSPGGVTLSSGERLAAATVVWCAGMRASRLTEQLPVA-RDRLGRLQVDDYLRVIGVPAMFAAGDVAAARMDDEHLSVMSCQHGRPMGRYAGCNVINDLFDQPLLALRIPWYVTVLDLGSAGAVYTEGWERKVVSQGAPAKTTKQSINTRRIYPPLNGSRADLLAAAAPRVQPRP |
3H8L Chain:A ((2-357)) | -TKVLVLGGRFGALTAAYTLKRLVGSKA------DVKVINKSRFSYFRPALPHVAIGVRDVDELKVDLSEALPEKGIQFQEGTVEKIDAKSSMVYYTKPDGSMAEEEYDYVIVGIGAHLATELVKGWDKYGYSVCEPEFATKLREKLESFQGGNIAIGSGPFYQGHNPKPKVPENFVPNADSACEGPVFEMSLMLHGYFKKKGMLDKVHVTVFSPGEYLSDLSPNSRKAVASIYNQLGIKLVHNFKIKEIREHEIVDEKGNTIPADITILLPPYTGNPALKNSTPDLVDDGGFIPTDLNMVSIKYDNVYAVGDANSMTVP-----------------------------KLGYLAVMTGRIAAQHLANR-------------------------LGVPTKVDKYYPT------IVCVADNPYE |
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General information:
TITO was launched using:
| RESULT:
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Template: 3H8L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -213464 for 2724 contacts (-78.4/contact) +
2D Compatibility (PS) -35587 + (NN) -11978 + (LL) 4144
1D Compatibility (HY) -13200 + (ID) 2900
Total energy: -272985.0 ( -100.21 by residue)
QMean score : 0.360
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