Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKAIFITGAGSGMGREGATLFHANGWRVGAIDRNEDGLAALRVQLGAERLWA--RAVDVTDKAALEGALADFCAGNVGGGLDMMWNNAGIGEGGWFEDVPYEAAVRVVDVNFKAVLTGAYAALPYLKKAPGSL------MFSTSSSSGTYGMPRIAVYSATKHAVKGLTEALSVEWQRHGVRVADVLPGLIDTAILTSTRQHSDEGPYTISAEQ----IRAAAPKKGMFRLMPSSSVAEAAWRAYQHPTRLHWYVPRSIRWIDRLKGVSPEFVRRHIAKSLATLEPKRK |
| 1W4Z Chain:B ((30-254)) | ----LVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERY--GPVDVLVNNAGRPGGGATAELADELWLDVVETN----LTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHY--------TEEAFDRITARVP---IGRYVQPSEVAE-------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1W4Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -70388 for 1674 contacts (-42.0/contact) +
2D Compatibility (PS) -22121 + (NN) -11062 + (LL) 5288
1D Compatibility (HY) -13200 + (ID) 3750
Total energy: -115233.0 ( -68.84 by residue)
QMean score : 0.304
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