Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDTVLGLSITPTTLGWVLAEGHGADGAILDRNELELHSGRNAQAIHTAEQLAAEVLLAHEVAAAGDHRLRVIGVTWNAEASAQAALLVESLTGAGFDNVVPVRRLRAIETLAQAIAPVIGYEQIAVCVLEHESATVVMVDTHDGKTQIAVKHVCRGL----------------------------------------------------------------SGLTSWLTGMFGRDA--WRPAGVVVVGSDSEVSEFSWQLERVLPVPVFAQ-------TMAQVTVARGAALAAAQSTEFTDAQLVADSVSQPTVAPRRSRHYAGAAAALAAAAVTFVASLSLAVGIQLAPHNDTGTAKHGAHKPTPRIAKAVAPAVPPPPTVTPPVPARAPRPAAQHEPPARVTSGEALTEPNPPEEQPNASAPQQDRNDSQPITRVLEHIPGAYGDSAPPAE |
| 3WT0 Chain:A ((176-390)) | -------------------------------------------------------------------------IAIQKSIL-I--NMIKCVEACGVDVLDVYSDAYNYGSILT---ATEKELGACVIDIGEDVTQVAFYERG--ELVDADSIEMAGRDITDDIAQGLNTSYETAEKVKHQYGHAFYDSASDQDIFTVEQVDSDETVQYTQKDLSDFIEARVEEIFFEVFDVLQDLGLTKVNGGFIVTGGSANLLGVKELLSDMVSEKVRIHTPSQMGIRKPEFSSAISTISSSIAF------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WT0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -84174 for 1029 contacts (-81.8/contact) +
2D Compatibility (PS) -14927 + (NN) -3719 + (LL) 13496
1D Compatibility (HY) -3600 + (ID) 600
Total energy: -93524.0 ( -90.89 by residue)
QMean score : 0.353
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