Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNHPDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAFGGVDKLVANAGVVHLASLIDT--TVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVGGTGAYGMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTP-----MQQTAMAMFDGALGAGGARSMIARLQGRMAAPEEMAGIVVFLLSDDASMITGTTQIADGGTIAALW
3TZQ Chain:E ((8-254))
----ELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAAYDMSTAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGLPQPIVDIF-----------ATHHLAGRIGEPHEIAELVCFLASDRAAFITGQVIAADSGLLAHL-
General information:
TITO was launched using:
RESULT:
Template:
3TZQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -169305 for 2081 contacts (-81.4/contact) +
2D Compatibility (PS) -26146 + (NN) -5156 + (LL) 104
1D Compatibility (HY) -16800 + (ID) 4750
Total energy: -222053.0 ( -106.70 by residue)
QMean score : 0.398
(partial model without unconserved sides chains):
PDB file :
Tito_3TZQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TZQ-query.scw
PDB file :
Tito_Scwrl_3TZQ.pdb
: