Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---MAELTETSPETPETTEAIRAVEAFLNALQNEDFDTVDAALGDDLVYENVGFSRIRGGRRTATLLRRMQGRVGF-EVKIHRIGADGAAVLTERTDALIIGP--LRVQFWVCGVFEVDDGRITLWRDYFDVYDMFKGLLRGLVALVVPSLKATL
1NWW Chain:A ((5-149))
IEQPRWASKDSAAGAASTPDEKIVLEFMDALTSNDAAKLIEYFAEDTMYQNMPLPPAYGRDAVEQTLAGLFTVMSIDAVETFHIGSSNGLVYTERVDVLRALPTGKSYNLSILGVFQLTEGKITGWRDYFDLREFEEAVDLPLRG----------
General information:
TITO was launched using:
RESULT:
Template:
1NWW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -77551 for 1011 contacts (-76.7/contact) +
2D Compatibility (PS) -14929 + (NN) -6349 + (LL) 1004
1D Compatibility (HY) -6800 + (ID) 1750
Total energy: -106375.0 ( -105.22 by residue)
QMean score : 0.451
(partial model without unconserved sides chains):
PDB file :
Tito_1NWW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1NWW-query.scw
PDB file :
Tito_Scwrl_1NWW.pdb
: