Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRARPLTLLTALAAVTLVVVAGCEARVEAEAYSAADRISSRPQARPQPQPVELLLRAITPPRAPAASPNVGFGELPTRVRQATDEAAAMGATLSVAVLDRATGQLVSNGNTQIIATASVAKLFIADDLLLAEAEGKVTLSP------------------------EDHHALDVMLQSSDDGAAERFWSQDGGNAVVTQVARRYGLRSTAPPS-D-G------RWWNTISSAPDLIRYYDMLLDGSGGLPLDRAAVIIADLAQSTPTGIDGYPQRFGIPDGLY-AEPVAVKQGWMCCIGSSWMHLSTGVI-GPE--RRYIMVIESLQPADDATARATITQAVRTMFPNGRI |
1GHP Chain:A ((3-236)) | -----------------------------------------------------------------------------ELNDLEKK---YNAHIGVYALDTKSGKEVKFNSDKRFAYASTSKAINSAILLEQVPYNK--LNKKVHINKDDIVAYSPILEKYVGKDITLKALIEASMTYSDNTANNKIIKEIGGIKKVKQRLKELGDKVTNPVRYDIELQYYSPKSKKDTSTPAAFGKTLNKLIANG-KLSKENKKFLLDLMLNN------KSG-DTLIKDGVPKDYKVADKSGQAITY-A--SRNDVAFVYPKGQSEPIVLVIFTNKD----------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GHP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -83569 for 1619 contacts (-51.6/contact) +
2D Compatibility (PS) -21903 + (NN) -11953 + (LL) 7984
1D Compatibility (HY) -3600 + (ID) 1850
Total energy: -114891.0 ( -70.96 by residue)
QMean score : 0.500
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