Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSTPTGSRRIFSGVQPTSDSLHLGNALGAVAQWVGLQDDHDAFFCVVDLHAITIPQD-PEALRRRTLITAAQYLALGIDPGRATIFVQSQVPAHTQLAWVLGCFTGFGQASRMTQ---FKDKSARQG-SEATTVGLFTYPVLQAADVLAYDTELVPVGEDQRQHLELARDVAQRFNSRFPGTLVVPDVLIPKMTAKIYDLQDPTSKMSKSAGTDAGLINLLDDPALSAKKIRSAVTDSERDIRYDPDVKPG--VSNLLNIQSAVTGTDIDVLVDGYAGHGYGD--LKKDTAEAVVEFVNPIQARVDELTADPAELEAVLAAGAQRAHDVASKTVQRVYDRLGFLL |
| 1YI8 Chain:C ((25-342)) | ---------VLTGDRPTG-ALHLGHLAGSLQNRVRLQDEAELFVLLADVQALTDHFDRPEQVRENVLAVALDYLAAGLDPQKTTCVVQSAVP---ELAELTVYFLNLVTVSHLRQNPTVKAEIAQKGYGERVPAGFFVYPVSQAADIAAFGATLVPVGDDQLPMLEQTREIVRRFNALYAPVLAEPQAQLSRVP-RLPGL-DGQAKMSKSLGNAIALGDSADE---VARKVMGMYTDPGHLRASDPGRVEGNPVFTFLDAFDP-DPARVQALKDQYRAGGLGDVKVKKHLIDVLNGVLAPIRTRRAEYERDPDAVLRFVTEGTARGREVAAQTLGQV-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YI8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -156807 for 2489 contacts (-63.0/contact) +
2D Compatibility (PS) -33538 + (NN) -15815 + (LL) 1548
1D Compatibility (HY) -16400 + (ID) 5350
Total energy: -226362.0 ( -90.94 by residue)
QMean score : 0.533
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