Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIFKVGDTVVYPHHGAALVEAIETRTIKGEQKEYLVLKVAQGDLTVRVPAENAEYVGVRDVVGQEGLDKVFQVLRAPHT-EEPTNWSRRYKANLEKLASGDVNKVAE-VVRDLWRRDQERGLSAGEKRMLAKARQILVGELALAESTDDAKAETILDEVLAAAS-
4L5G Chain:A ((3-164))
-EFRPGDKVVLPPYGVGVVAGIAQRSVSGVSRAYYQVDFPGSRSKAYVPVEAPHSVGLRKALAPEEVPVILDLLKNG-RMPLPKQWAARHRKTSEILADGNPYRIAQMAGQ-LRAWEVERGLPDLDRQALRRAIHLLAEEVAQSLEITVQEAKRLFEEAWGEELN
General information:
TITO was launched using:
RESULT:
Template:
4L5G.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12712 for 1087 contacts (-11.7/contact) +
2D Compatibility (PS) -17387 + (NN) -6266 + (LL) 176
1D Compatibility (HY) 0 + (ID) 1400
Total energy: -37589.0 ( -34.58 by residue)
QMean score : 0.349
(partial model without unconserved sides chains):
PDB file :
Tito_4L5G.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4L5G-query.scw
PDB file :
Tito_Scwrl_4L5G.pdb
: