Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSAKDFLVELGTEELPPKALNSLGEAFLSGIEKGLKAAGLSYAAARFYAAPRRLAVLVEQLAVQQPDRTVNLDGPPLQAAFDASGNPTQAALGFAKKCGVDLQQIDKSGPKLRFIQTIAGQPAAGLLPGIVEASLNELPIPKRMRWAARREEFVRPTQWLVMLFGDDVVECEILAQKAGRESRG-HRFHNPDNVRISSPAAYLEDLRGAHVLA---DFAERRELIAKRVAELAAEQQGSAIVPPSLLDEVTALVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFCL----LDANGKLLPRFITVANVES----KAPENIVSGNEKVVRPRLTDAEFFFKQDKKQPLESFNERLRNVVFQAQLGTVFEKAQRVS-GLAAYIAERIGGNAQNASRAGILSKCDLATEMVGEFPEMQGIAGYYYATHGGEAEDVALA-----LNEQYMPRGAGAELPSTLTGAAVAVADKLDTLVGIFGIGMLPTGSKDPYALRRA--ALGVLRILIEKQLDLDLVAA-VNAAVEQYGDKVKAAGLAEQVLDFVFDRLRARYEDEGVDVAVYQSVRALKPSSPLDFDQRVQAVQAFRQLPEAEALAAANKRVSNILAKSEDEVPPNVDASLLVEAAEKALGSAVANAESEVAPLAAARDYRAALARLAALREPVDTFFADVMVNVDDAAVRANRYALLAKLRGSFLGVADISLLG-- |
| 4ZCF Chain:C ((6-810)) | -------TLEKNLPHQKAGVDAVMNVFVSATPHLTDN-----VAVRLLANP--ELKLSEQQYYNNIKNVQAFNGIAHSKDNHNAKSN-----------IIDVSMETGTGKTYTYIKTIFDLNKSFGINKFIII------VPT-LSIKAGTVNFLKSDALKEHFRDDYKRELRTYVVESQKMPQAIHDFVEASNFK-----------KYIHVLVINSGMINSKSLTDTYDTGLLDNQFNT---PVDALRAVK-------PFIIIDEPHRFPTGKKTWENIEKFNAQYIIRYGATFSEGYKNLVYRLTAVDAFNDDLVKGIDAYIEDNANLKFVKDGKEATFFKLAK--SLSKTHSAIHDLTLDALNTAVLSNGIELKIGSSINPYSYDQTLADNMMRKAVKEHFKLEKELLTQ-PRIKPLTLFFIDDLKTKFEEYVLAEANELLYKNYLEKTVTNISSVHGGYIEQEINEILHDKELLLSLDNPRRFIFSKWTLREGWDNPNVFQICKLRSSKLQEVGRGLRLPVNEYMCRVK-----NFTLKYYVDFTEKD--------FVDSLVKEVNESSPSKFTQEL------KEQIDNFKDSDAYSRLKSELKELWDLINQKAVIEYKINSESEFLSIFKSFMLEETE-----RSYREFLDNLSQTIFVKHGTLHKVFCDIKDTILNIQTIRKIKSGFSKYLLNNSFSLGYNL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4ZCF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -40111 for 4452 contacts (-9.0/contact) +
2D Compatibility (PS) -63192 + (NN) -4829 + (LL) 6828
1D Compatibility (HY) -18800 + (ID) 4800
Total energy: -124904.0 ( -28.06 by residue)
QMean score : 0.139
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