Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSHSAKKALLPLLAVATLAGLAGCATETSTALPVQQVESVNRPYSGVRSPIAVG-KFDNRSSYMRGIFSDGVDRLGGQAK-TILITHL--QQTNRFNVLDR-------DNMSEIQQEAAIKGQAQRLKGADYVVTGDVTEFG-RKEVGD-RQLFGILGRGKSQIAYAKVALNIVNISTSEVVYSTQGAGEYALSNREVIGFGGTASYDSTLNGKVLDLAMREAVNKLVNAVDSGAWKPQNQ |
| 3DF8 Chain:A ((1-109)) | ---------------------------------------------------SNAMLRYGDTEICIDPSESVLHLLGKKYTMLIISVLGNGSTRQNFNDIRSSIPGISSTILSRRIKDLIDSGLVERRSGQI--TTYALTEKGMNVRNSLMPLLQYISVLDRN------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DF8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 22213 for 548 contacts (40.5/contact) +
2D Compatibility (PS) -10196 + (NN) -4421 + (LL) 9028
1D Compatibility (HY) 1200 + (ID) 750
Total energy: 17074.0 ( 31.16 by residue)
QMean score : 0.153
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