Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKTIGLGIATLLFSATALAAPKPCEELKAEIETKIQSAGVTSYTLEIVRNDEVSDPNMVVGSCENGTKKIIYQKNDD
5ABV Chain:B ((9-68))
---VSYDIEHLLYYSMSPHSWTLPTDWQKMQET----------APSILRNKDLQDES----QRFDGDKYLASIKTAA
General information:
TITO was launched using:
RESULT:
Template:
5ABV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1628 for 284 contacts (5.7/contact) +
2D Compatibility (PS) -6519 + (NN) -4376 + (LL) 1384
1D Compatibility (HY) -1600 + (ID) 600
Total energy: -10083.0 ( -35.50 by residue)
QMean score : 0.353
(partial model without unconserved sides chains):
PDB file :
Tito_5ABV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-5ABV-query.scw
PDB file :
Tito_Scwrl_5ABV.pdb
: