Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPLRLTITSYHKLTPGQCSEKVLDQG-QLTIGRGPD-NDWVLPDPERLVSSRHCTILNRD-GVYYLTDTST-NGVLLVNAGHRLRRGNSEPLQDGETVRLGEYDILVQLGHDIALPGSGNPQTDPFTSFDALMSRQAAGSAPAFAEPAPTPHPAVTAHFQGGSPLDTKPDLFDFLTPPPPGAAPRPDHVPAEQHDFRPPEPVIPPPPATTPAPPPAGGAPLIPADWDPFAELLGNTPAPSATPVAQPLPTAEPTPLAMPFADPGITQQPQPQPQPQPQPQPQPQPQPQPASVAAPTPPASAAASAGGDLLQAFLRGAGMTQLKVDPAGAEAQMEAIGRSYRGLVEGLVDVLRARASLKGEFRMAQTMIQPVQNNPLKFAPNVDEAMLLLLRRDNQAFMAPDRAVADSFEDLKAHQLAVMAGVQAAIRHLLARFEPAALEARFGKPAGLSGLLPGARQAQNWDSFTELYAKILREAEDDFQELFGREFSRAYEEHSARLRRS |
| 3GQS Chain:A ((5-103)) | --FLLKVLA-AN----IGAEFHLDSGKTYIVGSDPQVADIVLSD--MSISRQHAKIIIGNDNSVLIEDLGSKNGVIVEG--RKIEH--QSTLSANQVVALGTTLFLLVDYA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GQS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -59218 for 674 contacts (-87.9/contact) +
2D Compatibility (PS) -10338 + (NN) -4654 + (LL) 18268
1D Compatibility (HY) -6800 + (ID) 1150
Total energy: -63892.0 ( -94.80 by residue)
QMean score : 0.607
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