Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFSSSKLVNAVAQRLLDTIEQGRWVAGQMLPGQRELAEQMEISRPSLREAIMVLETLGVVRSLPGKGVMVLERSEPLREVAAPGEATMEDVLQLRYALEPFIVGIVAQSA-GAAEISELRLLLLDLREAVEDGDPQALVEAYTAFHRRLVKLTSNPIFLSVSEQIGSALERSDNLVRRQPEYAEEILQEHDAILRAIRQHDSERASQAMRQHILNEGARLNIDLRLPQV
3IHU Chain:A ((16-220))
-----SASDTVFFGIMSGLELGTFVPGQRLV-ETDLVAHFGVGRNSVREALQRLAAEGIVDLQRHRGAVIRRLSL----------QETLDVLDVAERMTGLLARAATRGSGNQPQVQALRASVQALVAAEKAQDGETFSNARRHFYRTLLEMGDNRELRRLFPTIHMPIVHAQHR---LASLRQMRLDDYRRIATAVLAGEPDAAEAAGAAHVKNVRGAILDRQ-----
General information:
TITO was launched using:
RESULT:
Template:
3IHU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -89773 for 1615 contacts (-55.6/contact) +
2D Compatibility (PS) -23138 + (NN) -15671 + (LL) 1436
1D Compatibility (HY) -5200 + (ID) 1950
Total energy: -134296.0 ( -83.16 by residue)
QMean score : 0.571
(partial model without unconserved sides chains):
PDB file :
Tito_3IHU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3IHU-query.scw
PDB file :
Tito_Scwrl_3IHU.pdb
: