Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVASKEPIMSQSERRFSFEFFPAKTEAGHEKLLATARNLAGYKPDFFSCTYGAGGSTRDRTLSTVLQLDGEVKVPTAPHLSCVGDSKAELRELLGRYREAGIRRIVALRGDLPSGMGMASGELRYANELVDFIRTETGDHFHIEVAAYPEVHPQARSFEDDLANFVRKVKAGASSAITQYFFNADAYFYFVERVAKLGVDIPVVPGIMPITNYSKLARFSDACGAELPRWIRKQLEAYGDDSRSIQAFGEQVISEMCERLLEGGAPGLHFYTLNQADPSLAIWKNLQLPR
1B5T Chain:C ((6-270))
----------------SFEFFPPRTSEMEQTLWNSIDRLSSLKPKFVSVTYGANSGERDRTHSIIKGIKDRTGLEAAPHLTCIDATPDELRTIARDYWNNGIRHIVALRGDLPP----------YASDLVTLLK-EVAD-FDISVAAYPEVHPEAKSAQADLLNLKRKVDAGANRAITQFFFDVESYLRFRDRCVSAGIDVEIIPGILPVSNFKQAKKFADMTNVRIPAWMAQMFDGLDDDAETRKLVGANIAMDMVKILSREGVKDFHFYTLNRAEMSYAICHTLGVRP
General information:
TITO was launched using:
RESULT:
Template:
1B5T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -162074 for 2048 contacts (-79.1/contact) +
2D Compatibility (PS) -28530 + (NN) -14430 + (LL) 1948
1D Compatibility (HY) -23600 + (ID) 5400
Total energy: -232086.0 ( -113.32 by residue)
QMean score : 0.612
(partial model without unconserved sides chains):
PDB file :
Tito_1B5T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B5T-query.scw
PDB file :
Tito_Scwrl_1B5T.pdb
: