Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLWPATLIGAGAGWALASIPGALLGGLLGQLLDRRLRLESWRGLLARLRGRAVNDEDDLLFQLLGYLAKSGGRVEEMHIRQAREEMALRKLDRRAQRRAIASFGKGKAGIAHLQAEVARLKGERAEAVLLACWRMAWAGGVLSQSARQLVLQWGRWLGWSAERTERLSARVMPKRTRAVARDSYREALLLLGVEAGSEPALIKRAYRKLISQHHPDKLAGAGASVERVRAATEKTRELQAAYALVREREGFR |
| 2DN9 Chain:A ((5-65)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SSGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDD-------PKAKEKFSQLAEAYEVLSDEVKRK |
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General information:
TITO was launched using:
| RESULT:
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Template: 2DN9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -13303 for 366 contacts (-36.3/contact) +
2D Compatibility (PS) -6695 + (NN) -3710 + (LL) 15812
1D Compatibility (HY) -2400 + (ID) 900
Total energy: -11196.0 ( -30.59 by residue)
QMean score : 0.810
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