Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDCLFCKIVAGEVPARKFYEDEEVVAFHDIGPQAPVHFLVIPKRHIPTLEHLTEADRPLAGHILFTAQRLAREQG-CEEGFRVVMNCNDLGGQTVHHIHMHVLGQRQMHWPPG
3N1S Chain:I ((4-108))
-ETIFSKIIRREIPSDIVYQDDLVTAFRDISPQAPTHILIIPNILIPTVNDVSAEHEQALGRMITVAA-IAEQEGIAEDGYRLIMNTNRHGGQEVYHIHMHLLGGRPLGPMLA
General information:
TITO was launched using:
RESULT:
Template:
3N1S.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -85546 for 709 contacts (-120.7/contact) +
2D Compatibility (PS) -11074 + (NN) -6305 + (LL) 308
1D Compatibility (HY) -8000 + (ID) 2250
Total energy: -112867.0 ( -159.19 by residue)
QMean score : 0.485
(partial model without unconserved sides chains):
PDB file :
Tito_3N1S.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3N1S-query.scw
PDB file :
Tito_Scwrl_3N1S.pdb
: