Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSGPTDTSTQPQGFSMTRLRLIGSAVLLSLSSMAMADSASQAEQFLKLVHADKLTVPVYAQVQQMLAQRFAQAKAPESKKAVLERYQAKANAELDRAIGWDKIKPELIKLYTTNFTESELKD----LNAFYQSPLGKKVLEKMPRLTAE--SAQLTQAKLQGAVEPVNKLMADMDKELGVAAPAQKKK |
4BJA Chain:A ((19-215)) | WVGNESENPFDLALNKKDRTLLRETWQRL-----DDPKDIVGLIFLDIVNDIEPDLKKVFGVDRAPRAAMLKMPKFGGHILRFYEFMEQLTSMLGTSENLTGAWQLVRKTGRSHVRQGFLEQNQNQMEKNYFEIVINVFIERLIPFLTGEQELNYTTSQITDVWKKFLNTVISQMTDSFELERAKQK- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BJA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 3048 for 1324 contacts (2.3/contact) +
2D Compatibility (PS) -18256 + (NN) -3173 + (LL) 536
1D Compatibility (HY) -4800 + (ID) 700
Total energy: -23345.0 ( -17.63 by residue)
QMean score : 0.313
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