Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLTGLNHLTLAVADLPASIAFYRDLLGFRLEARWDQGAYLELGSLWLCLSREPQY--GGPAADYTHYAFGIAAADFARFAAQLRAHGVREWK-QNRSEGD--SFYFLDPDGHRLEAHVGDLRSRLAACRQAPYAGMRFAD
4IR0 Chain:B ((3-131))
-LQGINHICFSVSNLEKSIEFYQKILQAKLLVKGRKLAYFDLNGLWIALNVEEDIPRNEIKQSYTHMAFTVTNEALDHLKEVLIQNDVNILPGRERDERDQRSLYFTDPDGHKFEFHTGTLQNRLEYYKEDKKHM-----
General information:
TITO was launched using:
RESULT:
Template:
4IR0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -73776 for 771 contacts (-95.7/contact) +
2D Compatibility (PS) -13773 + (NN) -6238 + (LL) 276
1D Compatibility (HY) -12400 + (ID) 2150
Total energy: -108061.0 ( -140.16 by residue)
QMean score : 0.445
(partial model without unconserved sides chains):
PDB file :
Tito_4IR0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4IR0-query.scw
PDB file :
Tito_Scwrl_4IR0.pdb
: