Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPDIRCIAVVGTGAMGTGIAQIAAQAGLTVWLFDSRAEAAAEARQRLRQTFESLCGK--GKLSAADAEAAQNRLRV----AERLEQLGDCELVVEAIVERLEAKQELLRRLEAIVAPESILASNTSSLSITAIAAACERPQRVAGFHFFNPVPLMRVVEVVDGLASAPEVGDALLALAARLGHRGVRTKDSPGFIVNHAGRAYGTEALRILGEGVAECAEIDRVLRECAGFRMGPFELLDLTGLDVSHPVMESIYQQYYQEPRYRPHPLTRQLLAAGRLGRKSGQGFYRYVDGQPQDKPGPQPVPQAAARPPVWLGCENEDDRRTLAELLHRLGVEPETGERPSAAALCLLAAWGEDLSSAVQRFACPAERSVGIDLLCDLERRRCLMLSPLTAPAMRDAAHALLAGDGVGVTVLRDSPGFVVQRVLAMIVNLACDIAQQGIASVEDIDQAVHLGLGYPHGPLEWGDRLGPRRLLSILQRLQALTGDPRYRPSPWLRRRAQLGMSLRAGETAAVD |
1F17 Chain:B ((15-301)) | ---VKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDECVEKTLSTIATSTDAASVVHSTDLVVEAIVENLKVKNELFKRLDKFAAEHTIFASNTSSLQITSIANATTRQDRFAGLHFFNPVPVMKLVEVIKTPMTSQKTFESLVDFSKALGKHPVSCKDTPGFIVNRLLVPYLMEAIRLYERGDASKEDIDTAMKLGAGYPMGPFELLDYVGLDTTKFIVDGWHEMDAENPLHQPSPSLNKLVAENKFGKKTGEGFYKYK-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1F17.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -164171 for 2260 contacts (-72.6/contact) +
2D Compatibility (PS) -31306 + (NN) -17363 + (LL) 14052
1D Compatibility (HY) -20400 + (ID) 5450
Total energy: -224638.0 ( -99.40 by residue)
QMean score : 0.454
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