Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDDIETRVRKLVAARFGVEECDIRLDSDFRNDFGAESLEVVELVMALEAEFGVEIADDDAERIETVRQAIDYLEEAVPT
3EJD Chain:E ((20-92))
MSTIEERVKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKITTVQAAIDYINGH---
General information:
TITO was launched using:
RESULT:
Template:
3EJD.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38327 for 479 contacts (-80.0/contact) +
2D Compatibility (PS) -8049 + (NN) -5004 + (LL) 352
1D Compatibility (HY) -7600 + (ID) 1800
Total energy: -60428.0 ( -126.15 by residue)
QMean score : 0.662
(partial model without unconserved sides chains):
PDB file :
Tito_3EJD.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3EJD-query.scw
PDB file :
Tito_Scwrl_3EJD.pdb
: