Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNQTNLDDTLDVLNDLLQTSKDGEAGFHACAEDLRDPQLKAAMLEQSRDCAAAADELERIVLELGGKPKDSTSFAGDLHRRWVDLKSLVTGKDEEAVLNECERGEDVAKHRYQAALEKSLPAEIHQVIERQYQGVLRHHDRVRALRDARA------
2IB0 Chain:A ((17-158))
---SEGSADNAALCDALAVEHATIYGYGIVSALS-PPGVNFLVADALKQHRHRRDDVIVMLSARGVTAPIAAA----------GYQLPMQVSSAADAARLAVRMENDGATAWRAVVEHAETADDRVFASTALTESAVMATRWNRVLGAWPITAAFP
General information:
TITO was launched using:
RESULT:
Template:
2IB0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -10235 for 1029 contacts (-9.9/contact) +
2D Compatibility (PS) -15374 + (NN) -11162 + (LL) 1144
1D Compatibility (HY) 800 + (ID) 700
Total energy: -35527.0 ( -34.53 by residue)
QMean score : 0.656
(partial model without unconserved sides chains):
PDB file :
Tito_2IB0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2IB0-query.scw
PDB file :
Tito_Scwrl_2IB0.pdb
: