Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------------------------MAEINIYQNPGQSLANIYKGFARQCNPGFVFPEAQTIEAWDIPLRLHPEFIPGGDISKADQQYSTLLAQEIANGVTIGFRMVNEKERVCNV--EILPL----LTSMAQNLDRIKARFGSGYLDRFKGSPNVYPTDVGFSTDASGGISQ------------ESGLLVSYGVNLR--TLTPGTWQAMT--LPEDIKALV--GPGVGLRLDAPNFSDVFNTIKSGL-------RYTTAVTLLLAYFAAI- |
| 4U6U Chain:B ((8-289)) | QDILEPFERALKLQTVSSKIHQTTTLLRSSLIYVHMISQLQMMPLETDSTDDAALACGLKIAALHSQLKINIAANPNLATLQLIKSCENNVVSPNRQELLRYLSTNLTRDCLNNLKMENNPKRIVTLIKALYTLSPVDLFDTIDKVLSSKIQTTAQVLSKTITSIRNFNLSLDDAMENRNSILTLQNLMAACAIEGNTNTLRNYLSQRKFSSLIDQFWSKVTNSFKRDFEMSYNRGGPVGKSLQS-NSNLIYEAISKCFGENDPSNELQGELQYILKAVSILD |
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General information:
TITO was launched using:
| RESULT:
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Template: 4U6U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -59355 for 1446 contacts (-41.0/contact) +
2D Compatibility (PS) -21597 + (NN) 5210 + (LL) -140
1D Compatibility (HY) -9200 + (ID) 1300
Total energy: -86382.0 ( -59.74 by residue)
QMean score : 0.196
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