Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------------MNAYLSDQPVRLSPLRD------EQGNQPRFG-----LLLEPGRPGMHVGELPAQWLKGLARSHHLLLLRGFAAFA---DAESLTRYCHD------FGEVMLWPFGAVLELVEQEGAE----------DHIFANN------------YVPLHWDGMYLETVPEFQVFHCVDAPGDSDGGRTTFSSTPAALQLADSSELELWRRASGRYQRSAAHYSSRSAAPIVERHPRREFPILRFCEPPVEGDASFINPSEFHYDG-IAPEQRGELLASLRRCLYHPQAHYAHRWRSDDLVIADNLTLLHGREAFAHRAPRHLRRVHIHAEPALRNPHLQRD |
| 2GOP Chain:A ((10-347)) | TFAKFAYLSDPRTKGELVAYVLTKANLKDNKYENTIVIENLKNNARRFIENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETL-SSKKILEAKNIRSLEWNEDSRKLLIVGFKRREVPAWEKTTFWIFDTESEEVIEEFEKPRFSSGIWHRDKIVVNVPHREIIPQYFKFWDIYIWEDGKEEKMFEKVSFYAVDS----DGERILLYGKPEKKYMSEHNKLYIY---DGKEVMGILDEVDRGVGQAKIKDGKVYFTLFE------EG-----SVNLYIWDGEIKPIAKGR--------------HWIMGFDVDEIVVYLKETATRLRELFTWDGEEKQL-------TDYNDPIFAKL |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GOP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -24963 for 1693 contacts (-14.7/contact) +
2D Compatibility (PS) -25256 + (NN) 11340 + (LL) 2820
1D Compatibility (HY) -8000 + (ID) 2450
Total energy: -46509.0 ( -27.47 by residue)
QMean score : 0.055
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