Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MHQRQHFEALAEDLRRHLAEGEDFTLWYSAEDSEFIRFNRARVRQAGRVRQASALLRLIRDERQASLDLTLSGAPEEDRQRLAEGLRQLRQSLAWIPADPYLLLDTSAWQRENQDLGAAPDSGALLASLERRARDLDLVGIYAAGPLFRGFANSWGAFGWHAGSSFNFDWSLFHGNGQAVKADYAGQRWDDEAFARRFEQAREQLGHLGKPLRQLRPGDYRAYLAPAALEEVMQMLCWGGFSARALATGESPLQRLQNGDALLSPLLNLAERPATSPSPAFSAEGSPRAEVELVGNGRLSGRLVSSRSAREYGLVANGAGANEAPTALDMAGGSLEQARILEALDTGLYIGNLWYLNYSDMPAARLTGMTRFATFWVENGQIRAPVS-TMRFDDSLYSFLGAHLEDLSHERELRLSSNTYGERQTDSMHLPGALTGRFTLTL |
3LZC Chain:A ((1-342)) | -------------------------MLHEIP--------------------KSEILKELKRIGAKRVLIQSPEGLRREAEELAGFLEENNIEVFLHGEINY--------------------GACDPADREAKLVGCDALIHLGHSYMKL--PLEVPTIFVPAFARVSVVEALKENIGEIKKLGRKIIVTTTAQHIHQLKEAKEFLESEGFEVSIGRGDS-----RISWPGQVL------GCNYSVAKVRGEGILFIGSGIFHPLGLAVATRKKVLAIDPYTKAFSWIDPERFIRKRWAQIAK---AMDAKKFGVIVSIKKGQLRLAEAKRIVKLLKKHGR-----------EARLIVMNDVNYHKLEGFPF--EAYVVVACPRVPLDDYGAWRKPVLTPKEVEIL-LGLREEYEFDEILGGPRESDEPFGISIHSTR----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LZC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -41119 for 2832 contacts (-14.5/contact) +
2D Compatibility (PS) -35170 + (NN) -9865 + (LL) 8056
1D Compatibility (HY) -3600 + (ID) 2000
Total energy: -83698.0 ( -29.55 by residue)
QMean score : 0.282
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