Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRIENRVFLVTGGSSGLGAATAKMLVEQGGKVVLADINAEAGAAKAAELGAQARFVRADIASEADGRQAVAAALEAFGGLHGLANCAGVAPAEKVL--GRNGIHALESFRRVIDINLVGSFNMLRLAAEAMSQGQPDEGGERGVIVNTASVAAFDGQIGQAAYSASKSGVVGMTLPIARELARFGIRVMTIAPGIFETPMMAGMPQEVRDSLGASVPFPPRLGRPDEYAALVRQIIENSMLNGEVIRLDGAIRMAAR
1E3W Chain:C ((8-259))
--VKGLVAVITGGASGLGLSTAKRLVGQGATAVLLDVPNSEGETEAKKLGGNCIFAPANVTSEKEVQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQVHTLEDFQRVINVNLIGTFNVIRLVAGVMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVVTIAPGLFATPLLT-------NFLASQVPFPSRLGDPAEYAHLVQMVIENPFLNGEVIRLDGAIRM---
General information:
TITO was launched using:
RESULT:
Template:
1E3W.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -135691 for 2100 contacts (-64.6/contact) +
2D Compatibility (PS) -26725 + (NN) -11302 + (LL) 1108
1D Compatibility (HY) -25200 + (ID) 6900
Total energy: -204710.0 ( -97.48 by residue)
QMean score : 0.519
(partial model without unconserved sides chains):
PDB file :
Tito_1E3W.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1E3W-query.scw
PDB file :
Tito_Scwrl_1E3W.pdb
: