Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNTYFDIPHRLVGKALYESYYDHFGQMDILSDGSLYLIYRRATEHVGGSDGRVVFSKLEGGIWSAPTIVAQAG-G---QDFRDVAGGTMPSGRIVAASTVYE-----TGEVKVYVSDDSGVTWVHKFTLARGGA--DYNFAHGKSFQ-------VG-ARYVIPLYAATG--VNYELKWLESSDGGETWGEGSTIYSGN--------TPYNETSYLPVGDGVILAVARVGSGA--GGALRQFISLDDGGTWTDQGNVTAQN-G--DS--TDILVAPSLSYIYSEGGTPHVVLLYTNRT--------THFCYYRTILLAKAVAGSSGWTERV-PVYS--APAASGYTSQVVLG----GRRILGNLFRETSSTTSGAYQFEVYLGGVPDFE--SDWFSVSSNSLYTLSHGLQRSP--RRVVVEFARSSSPSTWNIVMPSYFNDGGHKGSGAQVEVGSLNIRLGTGAAVWGTGYFGGIDNSATTRFATGYYRVRAWI |
| 2YDT Chain:A ((8-342)) | -----------------------------------------------------------GKTFSNVE-IFDPPTNYRDPQVLYARPLELSDGTLLG-TWENYSPEPPNVWFPIVKSKDGGKTWKEISKVKDTQNNWGLRYQPQ-LYELPRAFGKYPKGTVLCSGSSIPSDLSETLIEVYASRDKGYTWEFVSHVALGGEALPNPGLTPVWEPFL-MTYKEKLILYYSDQRDNATHSQKLVHQTTTDLKKWSKVVDDTKYANYYARPGMPTVAKLPNN----------EYIYVYEYGGGPNPPAGSDYWFPVYYRLSKDP--Q-KFLNKAHHQIVSNDGTTPAGSPYVVWTPYGGKNGTIVVSCGTR----------SEIFTNQ--ALGDASAWKKWDVPQPTAYTRSLLTFQKDPDLLMIMGA---------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YDT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -100981 for 2296 contacts (-44.0/contact) +
2D Compatibility (PS) -31502 + (NN) -15907 + (LL) 7156
1D Compatibility (HY) -8800 + (ID) 1600
Total energy: -151634.0 ( -66.04 by residue)
QMean score : 0.289
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