Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIKIKRGLDLPISGAPEQRIEAARPVRSVALIGFDYHGMKPTMAVQVGDRVKLGQVLFTDKKNPSVSYTAPGAGVVSAIHRGEKRVLQSVVIDLDGDEQLEFARYPADKLATLSAEQVRDNLLQSGLWTALRTRPFSKVPDPESSPSSIFVTAIDTQPLAADPQVVIAEQGEAFQAGLTVLGRLARVFLCKAEGVSLPGEALSGVTAQAFSGPHPAGLPGTHIHFLDPVGAGKSVWNLNYQDVIAIGKLFTTGQLWTERVIALAGPVVEKPRLVRTRLGANLDELAAGQLQPGNNRLISGSVLGGRTAHGAYAYLGRYHLQLSCLKEGDQREFLHYLRAGVEKHSLLNVFVSRLLGGKRFAFTTSTNGSPRAMVPVGNYEAVMPLDILPTQLLRYLIVGDTEMAQKLGALELDEEDLALCSYVCAGKYEYGPILRDNLARIEQEG |
4TXD Chain:A ((21-369)) | KRDVLAELGL------GDLRPYLRSIGDKDRIFPKAHRIEVVFLVRAANYLLLRTEGAGTINMTTLEYSG-GAMEVPVIQ-------PQKLMAVTRRQMLQLLREYRDSLDEVSKRWLVQEVIGKAKDLGFKKV---------SEEWNCTIQGMD-----------------GFCPHCTIFG-----------------AALTEQHNEKFGGL-SIGIK-TRVRF-DPAFATQRRITPETHNKVTEGHLSMTGQALFSEVHVEPGTVF----IGRAELV----DLTEPELVATLYSLATLRELGGRS--GIY---------------------------GTVRVEILGVKAGKYASTTAYDLAAENAGK--------GYEEVKKNLKERLEKLGFTPVDNSKLLAAVD----HKDPNGLFKDLWRSSIDFAEKMVKWVEELKGGG |
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General information:
TITO was launched using:
| RESULT:
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Template: 4TXD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -71969 for 2782 contacts (-25.9/contact) +
2D Compatibility (PS) -34939 + (NN) 4067 + (LL) 6564
1D Compatibility (HY) -11200 + (ID) 3100
Total energy: -110577.0 ( -39.75 by residue)
QMean score : 0.202
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