Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPIHWKPFLAPSTLALKFAIKTLLAGGLALWCAFRFDLEQPQWALMTVLIVSQPLSGMVVAKGLFRLLGTLVGTAMSVLMIALFAQAPWLFLLAISLWLGLCTAASTSLRNHVSYAFVLSGYTVAIIGLPAVDQPLLVFEQAVARCTEICLGIICASAVSAILWPQRVEQNLDKQAHATWLLGMQAARGEIDPRQRQPQGLLNALSKIVEVDAQRDHAWFEGERGRRRAGALALLSRDLLSLLRTARGVARQRARLSEEEERRVERWLAALASALEGTDPASMQALREELAQVAVEPQWSNDQRYLLTRCSVLLLKAVNAEKGMRAVASGEVEGRVGSAGTLSWHRDLQMALFYGTRSALALLGLSVYWIYTAWPAASGAMLLAAVVCSLFANRDNAVAIGLSFLRGIVYAIPAAMLVSQWLLPQWNGFPLLCLAMGVPLFFATLGMAVPVTAGTATSFAIHFIVLVAPRNQMDYNLATLLNSAQGVLIGVGFAVVIFRLLTLRPGWLTRRLLDATCVDLGRLTRRPLAQAENWFGGRMADRLLRLARHANLLPEQERRRWDDGLLALDLGNELIHLRACLEGARGVLRKARDRFLGELGELLEAGPAGPRSDRLERISLPLREALERDARHDDEASRLARAALAQLLFTWQQWCHQEESHESA |
4EZO Chain:B ((155-207)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LHSTRKQVEEAGDKLPADDKTAIESALTALETALKGEDKAAIEAKMQELAQVS---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4EZO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -13526 for 294 contacts (-46.0/contact) +
2D Compatibility (PS) -6172 + (NN) -4710 + (LL) 51304
1D Compatibility (HY) -2800 + (ID) 950
Total energy: 23146.0 ( 78.73 by residue)
QMean score : 0.905
|
|
|