Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPKSFRHLVQALACLALLASASLQAQESRLDRILESGVLRVATTGDYKPFSYRTEEGGYAGFDVDMAQRLAESLGAKLVVVPTSWPNLMRDFADDRFDIAMSGISINLERQRQAYFSIPYLRDGKTPITLCSEEARFQTLEQIDQPGVTAIVNPGGTNEKFARANLK-KARILVHPDNVTIFQQIVDGKADLMMTDAIEARLQSRLHPE--LCAVHPQQPFDFAEKAYLLPRDEAFKRYVDQWLHIAEQSGLLRQRMEHWLEYRWPTAHGK |
2PVU Chain:A ((38-268)) | --------------------------------GATKKKVVVGTDAAFAPFEYMQ-KGKIVGFDVDLLDAVMKAAGLDYELKNIGWDPLFASLQSKEVDMGISGITITDERKQSYDFSDPYFEATQVILVKQGS--PVKNALDLK--GKTIGVQNATTGQEAAEKLFGKGPHIKKFETTVVAIMELLNGGVDAVITDNAVANEYVKNNPNKKLQVIEDPKNFASEYYGMIFPKNSELKAKVDEALKNVINSGKYTEIYKKWFGKEPKLD--- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2PVU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -114489 for 1870 contacts (-61.2/contact) +
2D Compatibility (PS) -25329 + (NN) -12479 + (LL) 3496
1D Compatibility (HY) -7600 + (ID) 2400
Total energy: -158801.0 ( -84.92 by residue)
QMean score : 0.433
|
|
|