Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------MNSSRSVNPRPSFAPR-ALSLA------------IALLLGAPAFAANSGEAP------KNFGLDVKITGESEND------------RDLGTAPGGTLNDIGIDLRPWAFGQWGDWSAYFMGQAVAATDTIETDTLQS-DTDDGNNSR--NDGREPDKSYLAAREFWVDYAGLTAYPGEHLRFG-RQRLR--EDSGQWQDTNIEALNWSFETTLLNAHAGVAQ-RFSEYRTDLDELA--------PEDKDRTHVFG-DISTQWAPHHRIGVRIHHADDSGHLRRPGEEVDNLD----------------------------KTYTGQLTWLG--IEATGDAYNYRSSMPLNY--------WASATWLTGD----RDNLTTTTVDDRRIATGKQSGDVNAFGVDL---------GLRWNIDEQWKAGVGYARGSGGGKDGEEQFQQTGLESNRSNFTGTRSRVHRFGEAFRGELSNLQAATLFGSWQLREDYDASLVYHKFWRVDDDSDIGTSGINAALQPGEKDIGQELDLVVTKYFKQGL-LPASMSQYVDEPSALIRFRGGLF--KPGDAYGPGTDSTMHRAFVDFIWRF----------------------------- |
| 4X0Q Chain:A ((6-772)) | SLSIIDVASDQNLFQTFIKEWRCKKRFSISLACEKIRDDTLVVGLAVCWGGRDAYYFSLLDPSLTLKDRMWYLQSCLRKESDKECSVVIYDFIQSYKILLLSCGISLEQSYEDPKVACWLLDPDSQEPTLHSIVTSFLPHELPLLEGMETSQGIQSLGLNAGSEHSGRYRASVESILIFNSMNQLNSLLQKENLQDVFRKVEMPSQYCLALLELNGIGFSTAECESQKHIMQAKLDAIETQAYQLAGHSFSFTSSDDIAEVLFLELKLPPQFSTSKDVLNKLKALHPLPGLILEWRRITNAITKVVFPLQREKCLNPFLGMERIYPVSQSHTATGRITFTEPNIQNVPRDFEIKMGMPFSISMRHAFVPFPGGSILAADYSQLELRILAHLSHDRRLIQVLNTGA-DVFRSIAAEWKMIEPESVGDDLRQQAKQICYGIIYGMGAKSLGEQMGIK-ENDAACYIDSFKSRYTGINQFMTETVKNCKRDGFVQTILGRRRYLPGIKDNN---PYRKAHAERQAINTIVQGSAADIVKIATVNIQKQLETFHSTFKSHGHREGMLQSDCPIRGGFFILQLHDELLYEVAEEDVVQVAQIVKNEMESAVKLSVKLKVKVKIGASWGELKDFDV |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4X0Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 33692 for 3366 contacts (10.0/contact) +
2D Compatibility (PS) -49652 + (NN) 6245 + (LL) 408
1D Compatibility (HY) -14400 + (ID) 4000
Total energy: -27707.0 ( -8.23 by residue)
QMean score : 0.078
|
|
|