Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPQIVILPHADHCPEGAVFEAKPGETILDAALRNGIE-IEHACEKSCACTTCHVIVRE-GLDSMEPSDELEDDMLD-KAWGLEPDSRLSCQAVVADE--DLVVEIPKYTINQVSEGH
4LTU Chain:B ((2-104))
-PSITFI-HPDGRSE--IVDAAIGDSAMFAALNHGIDSIVAECGGNAVCATCHVYVDDLWLAKLPPVDANEDDLLDGTASDRLPNSRLSCQIKIAPELDGLVLRIPE----------
General information:
TITO was launched using:
RESULT:
Template:
4LTU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -45475 for 701 contacts (-64.9/contact) +
2D Compatibility (PS) -10995 + (NN) -6077 + (LL) 568
1D Compatibility (HY) -7200 + (ID) 2100
Total energy: -71279.0 ( -101.68 by residue)
QMean score : 0.497
(partial model without unconserved sides chains):
PDB file :
Tito_4LTU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4LTU-query.scw
PDB file :
Tito_Scwrl_4LTU.pdb
: