Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MHSTPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKAL-A-----EHPRLDNPVGPLAELLPQ--LDG--SIDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAK-------------SSIFYNRVKGELEQALQEQGWPQLTIARPSLLFGPREEFRLAEILA----APIARI-LPGKYHGIEACDLARALWRLALEEGK-------GVRFVESDELRKLGK |
2PZM Chain:A ((16-258)) | PRGSHMRILITGGAGCLGSNLIEHWLPQG--HEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLERAFDSFKPTHVVHSAAAYKDP-DDWAEDAATNVQGSINVAKAASKAGVKRLLNFQTALCYGRPATVPIPIDSPTAPFTSYGISKTAGEAFLMMSDVP-VVSLRLANVTGPRLAIGPIPTFYKRLKAGQKCFCSDTVRDFLDMSDFLAIADLSLQEGRPTGVFNVSTGEGHSIKEVFDVV- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PZM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -92759 for 1622 contacts (-57.2/contact) +
2D Compatibility (PS) -22495 + (NN) -9515 + (LL) 556
1D Compatibility (HY) 2800 + (ID) 1450
Total energy: -122863.0 ( -75.75 by residue)
QMean score : 0.446
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