Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKLLPLAVLAALSSVHVASAQAADVSAAVGATGQSGMTYRLGLSWDWDKSWWQTSTGRLTGYWDAGYTYWEG--GDEGAGKHSLSFAPV---FVYEFAGDSIKPFIEAGIGVAAFSGTRVGDQNLGSSLNFEDRIGAGLKFANGQSVGVRAIHYSNAGLKQPNDGIESYSLFYKIPI |
| 4N07 Chain:C ((62-121)) | -------------------------------------------------------------GARDADTKIWNGMVGELVYGKADIAIAPLTITYVREEVIDFSKPFMSLGISIMIKKGTPI--------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4N07.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -3552 for 223 contacts (-15.9/contact) +
2D Compatibility (PS) -5662 + (NN) -995 + (LL) 6628
1D Compatibility (HY) -2000 + (ID) 1000
Total energy: -6581.0 ( -29.51 by residue)
QMean score : -0.195
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