Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRTTPHLMLEPAFHPGLDTAGSGRDAIGLGAATSGRLDARHGTILSLEDINVSFDG-FKALRDLTLYIGVGELRCIIGPNGAGKTTLMDVITGKTRPQSGTAYFGDTLDLTRMS-EVQIAQAGIGRKFQKPT-VFEALSVFENLELAQRADKSVWASLRARLDGTQRERIEEVLATIRLLESRQRPAGLLSHGQKQFLEIGMLLVQEPQLLLLDEPVAGMTDAETEFTAELFKSLAR--KHSLMVVEHDMGFVGSIADHVTVLHQGHVLAEGSLAEVQADEQVIEVYLGR |
| 3GFO Chain:A ((4-237)) | ----------------------------------------EDYILKVEELNYNYSDGTHALKGINMNIKRGEVTAILGGNGVGKSTLFQNFNGILKPSSGRILFDN-KPIDYSRKGIMKLRESIGIVFQDPDNQLFSASVYQDVSFGAVNMKL--------PEDEIRKRVDNALKRTGIEHLKDKPTHCLSFGQKKRVAIAGVLVMEPKVLILDEPTAGLDPMGVSEIMKLLVEMQKELGITIIIATHDIDIVPLYCDNVFVMKEGRVILQGNPKEVFAEKEV------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GFO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -140277 for 1820 contacts (-77.1/contact) +
2D Compatibility (PS) -24549 + (NN) -8713 + (LL) 3292
1D Compatibility (HY) -15600 + (ID) 3250
Total energy: -189097.0 ( -103.90 by residue)
QMean score : 0.469
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