Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSFNTEVQPGICMEPDAITQEYVFNHTMLRVKDPKRSLDFYSRVLGMRLLRRLDFEEGRFSLYFLAMTRGEEVPDAVDERQRYTFGRQSVLELTHNWGSESDDSQ-YHNGNQDPRGFGHICFSVPDLVAACERFETLGVNFVKPLDRG-MKNVAFISDPDGYWVEIVQASLNGEMGRG
1BH5 Chain:B ((13-174))
-----EAALSCCSDADPSTKDFLLQETMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKGLAFIQDPDGYWIQIL-----------
General information:
TITO was launched using:
RESULT:
Template:
1BH5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -77556 for 1021 contacts (-76.0/contact) +
2D Compatibility (PS) -17532 + (NN) -11065 + (LL) 512
1D Compatibility (HY) -18000 + (ID) 4450
Total energy: -128091.0 ( -125.46 by residue)
QMean score : 0.446
(partial model without unconserved sides chains):
PDB file :
Tito_1BH5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BH5-query.scw
PDB file :
Tito_Scwrl_1BH5.pdb
: