Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIRLLNLTLQRGPQRLLEAAELTLHAGQ-KAGLIGANGAGKSSLFALLRGQLGQDAGDCLLPADWRIAHMRQEVDTLDRLAVDYVLDGDSRLREIQAALAVAEAAHDGSALARLHTELDNADGYTADARARKLLAGLGFSSEQMERRVGDFSGGWRMRLNLAQALMCPSDLLLLDEPTNHLDLDAILWLEEWLKGYPG---TLVLISHDRDFLDAVVDHVVHLENRKLTLYRGGYSAFERTRAERLAQQQQAYEKQQAQRAHMESFIARFKAKATKARQAQSRIKALERLEELAPAHVDSPFNFSFRESDKISRPLLDLGEGRLGYGDKAVLEKVKLQLVPGARIGLLGPNGAGKSTLIK-TLAGDLPELGGRLLRGENLAIGYFAQHQLDSLDPQ--ASPLLHLQRIAPGEREQTLKDFLGGFDFRGVRVDEPVLNFSGGEKARLALALIAWQKPNLLLLDEPTNHLDLEMRLALTMALQEF-SG---AVLVVSHDRHL-LKSTTDEF-LLVADGRVVPFDGDLDDYARWLVDYRARKAPQAETAPGA-P-TERTDKRAQRQAAAALRQQLAPHKREADKLERELGGLHEKLAAIEARLGD-SALYDVSRKDELRELLSEQSSLKVREGELEERWLEALETLEALQKELEASE |
| 1YQT Chain:A ((24-538)) | ----EEDCVHRYGVNAFVLYRLPVVKEGMVVGIVGPNGTGKSTAVKILAGQLIPNLCG----------DNDSWDGVIRAFRGNELQNYFEKLKNGEIRPVVKPQYVDLIPKAVKGKVIELLKKADETGKLEEVVKALELE-NVLEREIQHLSGGELQRVAIAAALLRNATFYFFDEPSSYLDIRQRLNAARAIRRLSEEGKSVLVVEHDLAVLDYLSDIIHVVYG-------EPGVYGIFSQPKGTRNGINEFLRGYLKDENVRFRPYEIKFTKTGERVEIER------------------------------ETLVTYPRLVKDYGSFRLEV-EPGEIKKGEVIGIVGPNGIGKTTFVKMLAGVEEPTEGKIEWDLT-----VAYKPQYIKADYEGTVYELLSKIDASKLNSNFYKTELLKPLGIIDLY-DREVNELSGGELQRVAIAATLLRDADIYLLDEPSAYLDVEQRLAVSRAIRHLMEKNEKTALVVEHDV-LMIDYVSDRLMVFEGEPGK------------------------YGRALPPMGMR-----------------------------------------------EGMNRFLASIGITFRRDPDTGRPRANKEGSVKDREQKEKGEYYYIA-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YQT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -72222 for 4205 contacts (-17.2/contact) +
2D Compatibility (PS) -52559 + (NN) -15592 + (LL) 11572
1D Compatibility (HY) -13600 + (ID) 4750
Total energy: -147151.0 ( -34.99 by residue)
QMean score : 0.247
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