Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------MTFAKGILAALALAAAVGQASATELEHWPAPAARQLNALI-----EANANKGAYAVFDMDNTSYRYDLEESLL--PYLEMKGVLTRDRLDPSLK------LIPFKDQAGHKESLFSYYYRLCEIDD---MVCYPW--------------VAQVFSGFTLRELKGYVDELMAYGKPIPATYYDGDKLATLDVEPPRVFSGQ--RELY----NKLMENGIE---VYVISAAHEELVRMVAADPR----YGYNAKPENVIGVTTLLKNRKTGELTTARKQIAEGK--------YDPKANLDLEVTPYLWTPATWMAGKQAAILTYI--DRWKRP--ILVAGDTPDSDGYMLFNGTAENG---VHLWVNRKAKYMEQINGMIKQHSAAQAKAGLPVTADRNWVIVTPEQIQ |
| 4OFZ Chain:A ((85-513)) | QTVDDFKNLMYKMQETRRAIVFALLNEKDLTKDDVEILKRAYEKLTDNFQREMCTLTTKLSVNIGDETRGLEKDLKYLDALMNIRREEPNLLWPIIMSRVDLFSILANYHPKGKETFLKEYEDTVKFLKTFISSEAITGKKPIFITDWDGTMKDYCSQYATNLQPVYSAVGMTRFAASFTRISAVLTAGPLRGPGILDLTAMPIDGPVMFSGSWGREWWLSGKRVVHQDGITDEGFNALQRLDDEMKDLLHTSPFALVGSGVQRKVDRLTLGVQTVCHHVTSELSNRYQMAVKERMHNSQILVFDPSTELEVEVVAHN-SGIIWNKGNGVERLIKSLGDSLQSPGKILICGDT-LSDIPMVRQAVKQNPDGVLAIFVGAKMSLREEVKQVIGDESRCCFVSCPDVIHAAMSQILNEHCIG |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OFZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -59935 for 2637 contacts (-22.7/contact) +
2D Compatibility (PS) -35950 + (NN) -6407 + (LL) 16
1D Compatibility (HY) -12400 + (ID) 3150
Total energy: -117826.0 ( -44.68 by residue)
QMean score : 0.156
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