Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRMRFSGISGCLSAAVLALGVGGAPVVQADALGDSLEQAHIRKATFAA-------PAWEG-----YTNADGSGLYWDLLKQVYAPYGLDVKFINM------------PWNRANKLMTAGSMVDGVPGEIPGVEGKLYAQLPIDIEYHG-------VMHAAKTPFSGRASLTGKRVGWRHSYNLIPAEQRDFTLVECVRPERCTEQVQN--GELDFFLDE-------PDELEKQRSEAHLPADAYPIAQL-------------------PPGKESFMTFADSAS---------GRLLREVYDARVRQMAASGEL--RALYQRWNSEVPGAVQALSAQ----
1TRK Chain:A ((3-337))---QFTDIDKLAVSTIRILAVDTVSKANSGHPGAPLGMAPAAHVLWSQMRMNPTNPDWINRDRFVLSNGHAVALLYSMLHL--TGYDLSIEDLKQFRQLGSRTPGHPEFELPGVEVTTGPLGQGISNAVGMAMAQANLAATYNKPGFTLSDNYTYVFLGDGCLQEGISSEASSLAGHLKLGNLIAIYDDNKITIDGATSISFDEDVAKRYEAYGWEVLYVENGNEDLAGIAKAIAQAKLSKDKPTLIKMTTTIGYGSLHAGSHSVHGAPLKADDVKQLKSKFGFNPDKSFVVPQEVYDHYQKTILKPGVEANNKWNKLFSEYQKKFPELGAELARRLSGQ


General information:
TITO was launched using:
RESULT:

Template: 1TRK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -49360 for 1908 contacts (-25.9/contact) +
2D Compatibility (PS) -27138 + (NN) -1910 + (LL) 800
1D Compatibility (HY) -6400 + (ID) 1750
Total energy: -85758.0 ( -44.95 by residue)
QMean score : 0.208

(partial model without unconserved sides chains):
PDB file : Tito_1TRK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1TRK-query.scw
PDB file : Tito_Scwrl_1TRK.pdb: