Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAAADEPKPKKLKVEAPEALSENVLFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYHAGGSTQNSMKVAQWMIQEPHRAATFFGCIGIDKFGEILKSKAADAHVDAHYYEQNEQPTGTCAACITGGNRSLVANLAAANCYKKEKHLDLENNWM-LVEKARVYYIAGFFLTVSPESVLKVARYAA-ENNRTFTLNLSAPFISQFFKEALMEVMPYVDILFGNETEAATFAREQGFET--KDIKEIA---RKTQALPKVNSKRQRTVIFTQGRDDTIVAT-----GNDVTAFPVLDQNQEEIVDTNGAGDAFVGGFLSQLVSNKPLTECIRAGHYAASVIIRRTGCTFPEKPDFH |
| 2ABS Chain:A ((34-379)) | -----------------------RVFAIGNPILDLVAEVPSSFLDEFFLKRGDATLATPEQMRIYSTLD-QFNPTSLPGGSALNSVRVVQKLLRKP-GSAGYMGAIGDDPRGQVLKELCDKEGLATRFMVAPGQSTGVCAVLINEKERTLCTHLGACGSF------RLPEDWTTFASGALIFYATAYTLTATPKNALEVAGYAHGIPNAIFTLNLSAPFCVELYKDAMQSLLLHTNILFGNEEEFAHLAKVHNLV-NKEHAVEVCTGALRLLT-AGQNTSATKLVVMTRGHNPVIAAEQTADGTVVVHEVGVPVVAAEKIVDTNGAGDAFVGGFLYALSQGKTVKQCIMCGNACAQDVIQHVGFSLSFT---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2ABS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -200790 for 2867 contacts (-70.0/contact) +
2D Compatibility (PS) -34124 + (NN) -8587 + (LL) 2352
1D Compatibility (HY) -22400 + (ID) 5550
Total energy: -269099.0 ( -93.86 by residue)
QMean score : 0.641
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