Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRVAVIGAGVIGLSTALCIHER-YHPAQPLHMKIYADRFTPFTTSDVAAGLWQPYLSDPSNPQEAEWNQQTFDHLQSCLHSPNAEKMGLALISGYNLF---RDEVPDPFWKSTVLGFRKLTPSELDMFPDYSYGWFNTSLLLEGKSYLSWLTERLTERGVKFIHRKVASFEEVVRGGVDVIINCTGVWAGAL-QADASLQPGRGQIIQVEAPWIKHFILTHDPSLGIYNSPYIIP-GSKTVTLGGVFQLGNWSELNSVHDHNTIWKSCCQLEPTL-KNARIMGELTGFRPVRPQVRLERERLRFGSSSAEVIHNYGHGGYGLTIHWGCAMEAANLFGKILEEKNLSRMPPSHL |
| 1EVI Chain:A ((1-340)) | MRVVVIGAGVIGLSTALCIHERYHSVLQPLDVKVYADRFTPFTTTDVAAGLWQPYTSEPSNPQEANWNQQTFNYLLSHIGSPNAANMGLTPVS-GYNLFREAVPD--PYWKDMVLGFRKLTPRELDMFPDYRYGWFNTSLILEGRKYLQWLTERLTERGVKFFLRKVESFEEVARGGADVIINCTGVWAGV-LQPDPLLQPGRGQIIKVDAPWLKNFIITHDLERGIYNSPYIIPGLQ-AVTLGGTFQVGNWNEINNIQDHNTIWEGCCRLEPTLK-DAKIVGEYTGFRPVRPQVRLEREQLRFGSSNTEVIHNYGHGGYGLTIHWGCALEVAKLFGKVLEERNLL------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1EVI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -233827 for 2871 contacts (-81.4/contact) +
2D Compatibility (PS) -35955 + (NN) -18586 + (LL) 136
1D Compatibility (HY) -40000 + (ID) 12500
Total energy: -340732.0 ( -118.68 by residue)
QMean score : 0.504
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