Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQPSPPPTELVPSERAVVLLSCALSALGSGLLVATHALWPDLRSRARRLLLFLSLADLLSAASYFYGVLQNFAGPSWDCVLQGALSTFANTSSFFWTVAIALYLYLSIVRAARGPRTDRLLWAFHVVSWGVPLVITVAAVALKKIGYDASDVSVGWCWIDLEAKDHVLWMLLTG-KLWEMLAYVLLPLLYLLVRKHINRAHTALSEYRPILSQEHRLLRHSSMADKKLVLIPLIFIGLR----VWSTVRFVLTLCGSPAVQTPVLVVLHGIGNTFQGGANCIMFVLCTRAVRTRLFSLCCCCCSSQPPTKSPAGTPKAPAPSKPGESQESQGTPGELPST |
3UM7 Chain:A ((25-290)) | ----------------------------------------RAMRSTTLLALLALVLLYLVSGALVFRALEQPHEQQAQRELGEVREKFLRAHPCVSDQELGLLIKEVADALGGGADPE----TQSTSAWDLGSAFFFSGTIITTIGYGNVALR------TDAGRLFCIFYALVGIPLFGILLAGVGDRLGSSLRHGIGHIEAIFLKWHPELVRVLSAMLFLLIGCLLFVLTPTFVFCYMEDWSKLEAIYFVIVTLTTVGFGDYV-AGADPRQDSPAYQPLVWFWILLGLAYFASVLTTIGNWLRVVSRRT------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3UM7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -149581 for 1731 contacts (-86.4/contact) +
2D Compatibility (PS) -26794 + (NN) -17705 + (LL) 3580
1D Compatibility (HY) -11200 + (ID) 1450
Total energy: -203150.0 ( -117.36 by residue)
QMean score : 0.258
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