Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---MPNSTTVMEFLLMRFSDVWTLQILHSASFFMLYLVTLMGNILIVTVTTCDSSLHMPMYFFLRNLSILDACYISVTVPTSCVNSLLDSTTISKAGCVAQVFLVVFFVYVELLFLTIMAHDRYVAVCQPLHYPVIVNSRICIQMTLASLLSGLVYAGMHTGSTFQLPFCRSNVIHQFFCDIPSLLKLSCSDTFSNEVMIVVSALGVGGGCFIFIIRSYIHIFSTVLGFPRGADRTKAFSTCIPHILVVSVFLSSCSSVYLRPPAIPAATQDLILSGFYSIMPPLFNPIIYSLRNKQIK--VAIKKIMKRIFYSENV----- |
| 1MRO Chain:C ((1-247)) | AQYYPGTTKVAQNRRNFCNPEYELEKLREIS--DEDVVKILGH-------------RAPGEEYPSVHPPLEE----MDEPEDAIREMVEPIDGAKAGD----------------------RVRYIQFTDSMYFAPA-------QPYVRSRAYLCRYRGADAGTLSG-----RQIIETRERDLEKISKELLE-----TEFFDPARSGVRG--------------KSVHGHSLRLDEDGMMFDMLRRQIYNK---DTGRVEMVKNQIGDELDEPVDLGEPLDEETLMEKTTIYRVDGEAYRDDVEAVEIMQRIHVLRSQGGFNL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1MRO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -185791 for 1804 contacts (-103.0/contact) +
2D Compatibility (PS) -24165 + (NN) -2107 + (LL) 8244
1D Compatibility (HY) 800 + (ID) 1900
Total energy: -204919.0 ( -113.59 by residue)
QMean score : 0.201
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