Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -----------------------------------------MTLRNSSSVTEFILVGLSEQPELQLPL---FLLFLGIYVFTVVGNLGLITLIGINPSLHTPMYFFLFNLS-------FIDLCYSCVFTPKMLNDF--VSESIISYVGCMTQLFFF-CFFVNSECYVLVSMAYDRYVAICNPLLYMVTMSPRVCFLLMFGSYV--VGFAGA----MAHTGSMLRLTFCDSNVID-HYLCDVLPLLQ-------LSCTSTHVSELVFFIVVGV--------ITMLSSISIVI-----------------SYALILSNILCIP---SAEGRSKAFSTWGSHIIAVALFFGSGTFTYLTTSFPGSMNH----GRFASVFYTNVVPMLNPSIYSLRNKDDKLALGKTLKRVLF------ |
4WZI Chain:A ((85-576)) | VTPFAQVLASLRSVRNNFTIQKLAMETLEELDWALDQLETIQTYRSVSEMASNKFKRMLNRELTHLSEMSRCGNQVSEYISNTFLDKENEDHLAKELEDLNKWGLNIFNVAGYSHNRPLTAIMYAIFQERDLLKTFRISSDTFITYMMTLEDHYHSDVAYHNSLHAADVAQSTHVLLS--TPALDAV-FTDLEILAAIFAAAIHDVDHPGVSNQFLINTNSELALMYNDESVLENHHLAVGFKLLQEEHADIFMNLTKKQRQTLRKMVIDMVLATDMSKHMSLLADLKTMVETKKVTSSGVLLLDNYTDRIQVLRNMVHAADLSNPTKSLELYRQWTDRIMEEFFQQGDKERERGMEISPMADKHTACVEKSQVGFIDYIVHPLWETWADLVQPDAQDILDTLEDNRNWYQAMIP |
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General information:
TITO was launched using:
| RESULT:
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Template: 4WZI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -276731 for 2133 contacts (-129.7/contact) +
2D Compatibility (PS) -30526 + (NN) -2703 + (LL) 312
1D Compatibility (HY) -5200 + (ID) 2500
Total energy: -317348.0 ( -148.78 by residue)
QMean score : 0.158
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