Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEGISNFKTPSKLSEKKKSVLCSTPTINIPASPFMQKLGFGTGVNVYLMKRSP--RGLSHSPWAVKKINPICNDHYRSVYQKRLMDEAKILKSLHHPNIVGYRAFTEANDGSLCLAMEYGGEKSLNDLIEERYKASQDPFPAAIILKVALNMARGLKYLHQEKKLLHGDIKSSNVVIKGDFETIKICDVGVSLPLDENMTVTDPEACYIGTEPWKPKEAVEENGVITDKADIFAFGLTLWEMMT-LSIPHINLSNDDDDEDKTFDESDFDDEAYYAALGTRPPINMEELDESYQKVIELFSVCTNEDPKDRPSAAHIVEALETDV |
4AOJ Chain:A ((46-317)) | ----------------------------------KWELGEGAFGKVFLAECHNLLP---KMLVAVKALKEAS-----ESARQDFQREAELLTMLQHQHIVRFFGVCT-EGRPLLMVFEYMRHGDLNRFLRSHGPD-PGPLGLGQLLAVASQVAAGMVYLAGL-HFVHRDLATRNCLVGQG-LVVKIGDFG-----------------TMLPIRWMPPESIL-YRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSN--------------TEAIDCITQGRELERPR----ACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALA |
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General information:
TITO was launched using:
| RESULT:
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Template: 4AOJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -84013 for 1844 contacts (-45.6/contact) +
2D Compatibility (PS) -26457 + (NN) -18303 + (LL) 3176
1D Compatibility (HY) -15200 + (ID) 2850
Total energy: -143647.0 ( -77.90 by residue)
QMean score : 0.490
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