Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AVASCGQVVSYLAPCIGYAMGRERAPGGGCCTGVRSLNAAAATPADRQATCTCLKQQTSGMGGIKPDLVAGIPSKCGVNIPYAISPRTDCSKVR
M042 Chain:A ((3-140))
AVASCGQVVSYLAPCIGYAMGRERAPGGGCCTGVRSLNAAAATPADRQATCTCLKQQTSGMGGIKPDLVAGIPSKCGVNIPYAISPRTDCSKVR
General information:
TITO was launched using:
RESULT:
Template:
M042.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4397 for 678 contacts (-6.5/contact) +
2D Compatibility (PS) -9070 + (NN) 1957 + (LL) 0
1D Compatibility (HY) 4800 + (ID) 400
Total energy: -7110.0 ( -10.49 by residue)
QMean score : -0.039
(partial model without unconserved sides chains):
PDB file :
Tito_M042.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-M042-query.scw
PDB file :
Tito_Scwrl_M042.pdb
: