Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--------------------MVKDEKSKTLFEVEGAVTALLPAAEFRVKLDNEHEIICHVSGKVRRSKIRIIIGDRVLVEMSIYDRNAKKGRIIRRLKGTSDRTISK---------------------------------------
1D7Q Chain:A ((1-143))
PKNKGKGGKNRRRGKNENESEKRELVFKEDGQEYAQVIKMLGNGRLEAMCFDGVKRLCHIRGKLRK-KVWINTSDIILVG--LRDYQDNKADVILKYNADEARSLKAYGELPEHAKINETDTFGPGDDDEIQFDDIGDDDEDIDDI
General information:
TITO was launched using:
RESULT:
Template:
1D7Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29762 for 560 contacts (-53.1/contact) +
2D Compatibility (PS) -8801 + (NN) 371 + (LL) 152
1D Compatibility (HY) -3600 + (ID) 850
Total energy: -42490.0 ( -75.88 by residue)
QMean score : 0.388
(partial model without unconserved sides chains):
PDB file :
Tito_1D7Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1D7Q-query.scw
PDB file :
Tito_Scwrl_1D7Q.pdb
: