Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | --MHLFCFGYGYVARFLSKKLLSLSWKVSGTSRNQD-------VHNTNFFNYDKVNKDTFQDVTHVLVSIPPDG--DDALERYGHYFQ-----NTKWLGYLSAASVYGDHAGNWVKEESETKPIESRGKSRLRAEKKWLNSKLPVHIFRLTGIYGPGRNVLVDLQLNKARNVQKEGHFFSRIHVEDISNILFSSMQNI---KPGEIYNCADDLPATQSEVVAYAAELLNVSVPEPVEISSLPDHAQSFYLGSKKVSNIKVKRDLGISLVYPNYKVGLENLISNQQAPIERGE |
3GPI Chain:A ((2-279)) | SLSKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQPMPAGVQTLIADVTRPDTLASIVHLRPEILVYCVAASEYSLSYVEGLRNTLSALEGAPLQHVFFVSSTGVYGQEVEEWLDEDTPPIAKDFSGKRMLEAEALLAA--YSSTILRFSGIYGPGRLRMIRQ-AQTPEQWPARNAWTNRIHRDDGAAFIAYLIQQRSHAVPERLYIVTDNQPLPVHDLLRWLADRQGIA---------YPAGATPPVQGNKKLSNARLLA-SGYQLIYPDYVSGYGALLAAMRE------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GPI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -121679 for 2079 contacts (-58.5/contact) +
2D Compatibility (PS) -27061 + (NN) -7230 + (LL) 740
1D Compatibility (HY) -10400 + (ID) 2650
Total energy: -168280.0 ( -80.94 by residue)
QMean score : 0.448
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