Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-----MLEVNILDKKWYSIVEDPK---GFTLNIINASLKELKIDQYKPNISIALADDNLLHQLNLRFRQMNKPTNVLSFPCEQLSSECDLGDIAISIDTVRKESDEYHIPIPAHVAHMLVHGLLHLLGYDHQKKGEEVVMKNLEGKILASLGYNMCAI
2JN9 Chain:A ((1-105))
MVKTLRLNNVTLEMAAYQEESEPKRKIAFTLNVTSETYHDIAVLLYEKTFNVEVPERDLAFRGEMT-NYSTSLTN--------LYEPGAVSEFYIEITEIDKNADS--------------------LEHHHHHH------------------------
General information:
TITO was launched using:
RESULT:
Template:
2JN9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28077 for 590 contacts (-47.6/contact) +
2D Compatibility (PS) -9606 + (NN) 2762 + (LL) 4504
1D Compatibility (HY) -4000 + (ID) 1000
Total energy: -35417.0 ( -60.03 by residue)
QMean score : 0.302
(partial model without unconserved sides chains):
PDB file :
Tito_2JN9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JN9-query.scw
PDB file :
Tito_Scwrl_2JN9.pdb
: