Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEFGNIKWFNAEKGYGFI-------KPEANGNDIFVHISTLERSGIR------PDSLRGENKEKGIKGERVSYELKEERGRNGEGKKFAINLKLLED
4A4I Chain:B ((11-79))
---GHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFMEGFRSLKEGEPVEFTFKKSSKGLESIRVTGPGGSPCLGSE--------------
General information:
TITO was launched using:
RESULT:
Template:
4A4I.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8866 for 316 contacts (-28.1/contact) +
2D Compatibility (PS) -5578 + (NN) 2069 + (LL) 860
1D Compatibility (HY) -5200 + (ID) 1150
Total energy: -17865.0 ( -56.53 by residue)
QMean score : 0.553
(partial model without unconserved sides chains):
PDB file :
Tito_4A4I.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4A4I-query.scw
PDB file :
Tito_Scwrl_4A4I.pdb
: