Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------MKEQKIQAFE-WFRA-LRDRVVES--FLL-IEGQSPTDPKIEKR-------KWDRPGGGGGESTIIYGDVFEKVGVNISKVYGKFADSVVNEIPGASESNGEFW-----ASGISL-VSHMQSPLVPAAHMNTRLIYTSKQWFGGGMDFTPTYKNEEDYKYIHESIKTTCDKFDAEYYLKFKEQCDNYFFLQHRKEPRGIGG-IFYDNLNSGRWENDFEFTKAVGETFLKIYLHIIRQHMRKPWTKEQRETQLIKRGRYVEFNLLYDRGTKFGLMTDGNPDAIMMSMPPLVKWM |
| 4RHO Chain:A ((4-259)) | DKIHHHHHHENLYFQGMEIKAMFRDVSLSSRNFSEMLSRESKVVAALAAKSPLMAHANWRLKGNSLEEATLY--PAFDADGSPSTPALAVLNEEQRGK--KHSASHAAIWNGNTRPNEGASMSCHVSDEKVLPDRFSTRL---------GVPDCYAK------SQDLADVVTTIVAAFNP---LVVEASPEGYFDKQVFDDKPGVGWMLYLPKVITQQQVPEARALIPVSAKGKQTGTIIVSVT-DAPFSVD--NPEHVAIANRIEIRLVDQD-----------------LLPAYVDI- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RHO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 1748 for 1733 contacts (1.0/contact) +
2D Compatibility (PS) -23657 + (NN) -663 + (LL) 2296
1D Compatibility (HY) -4800 + (ID) 1850
Total energy: -26926.0 ( -15.54 by residue)
QMean score : 0.146
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